dc.contributor.advisor | Kilway, Kathleen V., 1963- | |
dc.contributor.author | Sawant, Dattatray Kisan | |
dc.date.issued | 2017 | |
dc.date.submitted | 2017 Spring | |
dc.description | Title from PDF of title page viewed May 21, 2018 | |
dc.description | Dissertation advisor: Kathleen V. Kilway | |
dc.description | Vita | |
dc.description | Includes bibliographical references (pages 227-237) | |
dc.description | Thesis (Ph.D.)--Department of Chemistry and School of Biological Sciences. University of Missouri--Kansas City, 2017 | |
dc.description.abstract | The physicochemical properties of a molecule derive from its molecular structure, and
that structure often involves the orientation of one part of the molecule about a particular
bond with respect to the rest of the molecule. Additionally, the way the molecule will
react chemically and its available reaction pathways are often critically dependent upon
the architecture of the reactant molecule. The energy differences of various
conformations generally result from non-bonded interactions which, even though they are
individually too weak to determine any single geometric feature by themselves, may
nevertheless act together to uniquely determine the spatial structures of large and
complicated molecules such as proteins and even DNA. Therefore, conformational
analysis can lead to significant improvements in the understanding of more complex
systems.
The mid-infrared (3100-400 cm⁻¹) and Raman spectra (3200-20 cm⁻¹) of a number
of substituted ring and straight chain molecules were recorded in the gaseous, liquid and
solid phases. Additionally, variable temperature studies of the infrared spectra of the
sample dissolved in liquid xenon have been carried out. From these spectral data, the
possible stable conformers have been identified and the enthalpy differences are given
among the various forms for each molecule. By utilizing microwave determined
rotational constants for isotopomers, combined with structural parameters predicted from
MP2(full)/6-311+G(d,p) calculations, adjusted r0 structural parameters have been
obtained for the stable forms of some of the aforementioned molecules. Complete
vibrational assignments are proposed for the stable conformers of each molecule. To
support the vibrational assignments, normal coordinate calculations with scaled force
constants from MP2(full)/6-31G(d) calculations were carried out to predict the
fundamental vibrational frequencies, infrared intensities, Raman activities, depolarization
values and infrared band contours.
The abovementioned spectroscopic and computational methods have been
successfully applied for the determination of the enthalpy difference(s) between two or
more conformers and r₀ structural parameters of 2-methylbutane, isocyanocyclopentane,
cyanocyclopentane, cyclopropylcyanosilane, and (chloromethyl)fluorosilane. In the study
of 2-methylbutane, both the trans and gauche conformers have been identified and the
enthalpy difference between conformers has been determined to be 161 ± 5 cm⁻¹ (1.93 ±
0.06 kJ/mol) with the trans conformer the more stable form. The percentage of the
gauche conformer is estimated to be 18 ± 1% at ambient temperature.
For isocyanocyclopentane, the axial (Ax) and envelope-equatorial (Eq)
conformers have been identified. The enthalpy difference between these two conformers
has been determined to be 102 ± 10 cm⁻¹ (1.21 ± 0.11 kJ mol⁻¹) with the Ax conformer the
more stable form. The percentage of the Eq conformer is estimated to be 38 ± 1% at
ambient temperature.
Similar to isocyanocyclopentane, the Eq and Ax conformers have been identified
for cyanocyclopentane. The enthalpy difference between these two rotamers has been
determined to be 55 ± 12 cm⁻¹ (0.66 ± 0.14 kJ/mol) with the Eq conformer the more
stable form in this case. The percentage of the Ax conformer is estimated to be 45 ± 1% at
ambient temperature.
For cyclopropylcyanosilane, the enthalpy difference between the cis and gauche
conformers has been determined to be 123 ± 13 cm⁻¹ (1.47 ± 0.16 kJ mol⁻¹) with the cis
conformer as the more stable form. Approximately 48 ± 2 % of the cis form is present at
ambient temperature.
Both trans and gauche conformers are predicted and observed for
(chloromethyl)fluorosilane. The enthalpy difference between the trans and gauche
conformers in xenon solutions has been determined to be 109 ± 15 cm⁻¹ (1.47 ± 0.16
kJ mol⁻¹) and in krypton solution the enthalpy difference has been determined to be 97 ±
16 cm⁻¹ (1.16 ± 0.19 kJ mol⁻¹) with the trans conformer as the more stable form in both
cases. Approximately 46 ± 2 % of the trans form is present at ambient temperature.
For all aforementioned molecules, r₀ structural parameters have been determined
for heavy-atom bond lengths, bond angles, and dihedral angles. In addition, comparisons
with the conformations and r₀ structural parameters of related molecules have been made
and are discussed. | eng |
dc.description.tableofcontents | Introduction -- Experimental and theoretical methods -- r
0 structural parameters, conformational equilibrium, vibrational spectra and AB initio calculations studies of 2-methylbutane -- r0 structural parameters, conformational, vibrational studies and AB initio calculations of cyanocyclopentane -- r0 structural parameters conformational, vibrational studies and AB initio calculations of isocyanocyclopentane -- Microwave r0 structural parameters, conformational stability and vibrational assignment studies of cyclopropylcyanosilane -- Microwave r0 structural parameters, conformational stability and vibrational assignment studies of (chloromethyl) fluorosilane -- Conclusion | |
dc.format.extent | xviii, 239 pages | |
dc.identifier.uri | https://hdl.handle.net/10355/63275 | |
dc.publisher | University of Missouri--Kansas City | eng |
dc.subject.lcsh | Molecules -- Research | |
dc.subject.other | Dissertation -- University of Missouri--Kansas City -- Chemistry | |
dc.subject.other | Dissertation -- University of Missouri--Kansas City -- Biology | |
dc.title | Conformational Behavior and Structural Parameters of Some Cyclic and Chain Molecules | eng |
dc.type | Thesis | eng |
thesis.degree.discipline | Chemistry (UMKC) | |
thesis.degree.discipline | Molecular Biology and Biochemistry (UMKC) | |
thesis.degree.grantor | University of Missouri--Kansas City | |
thesis.degree.level | Doctoral | |
thesis.degree.name | Ph.D. | |